Products

Scionics has several prepackaged products available for purchase to assist you with your facility and research data management needs. These solutions are categorized into bioinformatics tools, research data processing software, and management & administration focused systems.


Bioinformatics Tool Suite - free for academics

  • DEQOR - high quality siRNA design
  • RiDDLE - genome-wide esiRNA database based on DEQOR
  • CUPID - cluster analysis and pathway mapping of high-throughput screening data
  • PORTOs - retrieving promoter regions of eukaryotic genomes
  • Scionics OrthologueDB
  • orFeus - finding weak sequence orthologuies (coming soon)
  • BLAST queue for bioinformatics cluster
Please find more information about Scionics' bioniformatics here.



Research Data Processing Software:

Data management has become one of the central issues in high throughput biological and chemical screening. These data include comprehensive information about bioactive molecules, targeted genes, the physical plates, the assays, and images as well as their extracted data matrices after acquisition and analysis. Scionics' web-based, high content data management solution HCData was designed to handle these challenges for you. Please find more information here.


HitBase can be used as a stand-alone version or as a module of HTData and is designed for data browsing as well as analyzing and presentation of large-scale screen data including microscope images. The database contains a compendium of publicly available data and provides information on experimental methods and phenotypic results, including raw data in the form of images and image analysis results. Phenotypic summaries together with graphical displays of RNAi to gene mappings allow quick intuitive comparison of results. Please find more information here.


Comparable to HitBase, MovieBase links research data to other variables. But, Moviebase uses time stamps of the research data as variables. Furthermore, it stores not only the research data but also connects associated images with time and thus creates a "movie". With this, MovieBase allows scientists to conduct a kinetic analysis of their experiments and also provides additional tools such as automatic clustering of different data sets and interactive charts. Please find more information here.


In high throughput screening, a vast amount of image and numeric data is created, which includes comprehensive information about the bioactive molecules, the targeted genes, and images as well as their extracted data matrices after acquisition. Screening Image Browser is a web-based bioinformatics solution for the management of images from different screening microscopes. A major outcome of this database will be a unique, fully operational, distributed digital library of screening image data accessible to researchers. Please find more information here.


LipidInspector version 0.9 performs lipid profiling by multiple precursor and neutral loss scanning. The applied data-dependent acquisition methods allow the emulation of simultaneous acquisition of an unlimited number of precursor and neutral loss scans in a single analysis. No separation of lipids is required, and the the accuracy of identification and quantification is not compromised. Please find more information here.



Management & Administration Focused Systems:

PyRAT (Python based Relational Animal Tracking) is a web based colony management database solution, enabling animal facilities to manage their information flow in a straightforward and transparent way. As the program has been developed in close collaboration with researchers and staff at one of our client's institutes, this animal facility management program is extremely user-friendly and provides a clearly positive return on investment for the facility. PyRAT also contains a work request manager to coordinate and track work flow within the facility, as well as its own user administration tools, access levels, and report engine. Please find more information here.


BaCe Bank is a searchable database of three linked types of record: (a) genes of interest and their products; (b) tagged BAC constructs; (c) stable cell lines. It provides an overview of the "pipeline of progress" in the generation of tagged BACs , production of cell lines, and affinity purification of tagged proteins. Please find more information here.


LabStorage is an internet enabled software package for the management of molecular biology lab inventory. Keeping track of large numbers and types of samples (DNA, RNA, plasmids, clones, proteins, peptides, probes, antibodies, enzymes, specimen, tissues, cell lines and more) and their precise location can be a task that costs a great deal not only in monetary terms but may also lead to frustrations and time loss. LabStore offers a complete solution for labs of institutes with integrated "data share" mechanisms. Please find more information here.
































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